Proteins	Positions within proteins	Leading proteins	Protein	Fasta headers	Localization prob	Score diff	PEP	Score	Delta score	Score for localization	Diagnostic peak	Number of BONCAT	Amino acid	Sequence window	Modification window	Peptide window coverage	BONCAT Probabilities	BONCAT Score diffs	Position in peptide	Charge	Mass error [ppm]	Ratio M/L	Ratio M/L___1	Ratio M/L___2	Ratio M/L___3	Ratio M/L normalized	Ratio M/L normalized___1	Ratio M/L normalized___2	Ratio M/L normalized___3	Ratio M/L unmod. pep.	Ratio M/L localized	Ratio M/L nmods	Ratio M/L variability [%]	Ratio M/L count	Ratio M/L iso-count	Ratio M/L type	Ratio H/L	Ratio H/L___1	Ratio H/L___2	Ratio H/L___3	Ratio H/L normalized	Ratio H/L normalized___1	Ratio H/L normalized___2	Ratio H/L normalized___3	Ratio H/L unmod. pep.	Ratio H/L localized	Ratio H/L nmods	Ratio H/L variability [%]	Ratio H/L type	Ratio H/L count	Ratio H/L iso-count	Ratio H/M	Ratio H/M___1	Ratio H/M___2	Ratio H/M___3	Ratio H/M normalized	Ratio H/M normalized___1	Ratio H/M normalized___2	Ratio H/M normalized___3	Ratio H/M unmod. pep.	Ratio H/M localized	Ratio H/M nmods	Ratio H/M variability [%]	Ratio H/M count	Ratio H/M iso-count	Ratio H/M type	Occupancy L	Occupancy M	Occupancy H	Intensity	Intensity L	Intensity M	Intensity H	Ratio mod/base L	Ratio mod/base M	Ratio mod/base H	Reverse	Potential contaminant	id	Protein group IDs	Positions	Position	Peptide IDs	Mod. peptide IDs	Evidence IDs	MS/MS IDs	Best localization evidence ID	Best localization MS/MS ID	Best localization raw file	Best localization scan number	Best score evidence ID	Best score MS/MS ID	Best score raw file	Best score scan number	Best PEP evidence ID	Best PEP MS/MS ID	Best PEP raw file	Best PEP scan number
CON__Q2KIG3	207	CON__Q2KIG3	CON__Q2KIG3	>Q2KIG3 TREMBL:Q2KIG3 (Bos taurus) Similar to carboxypeptidase B2	1	47.743	0.0228169	62.714	10.031	47.743		1	M	IWFVGSVTYYYGKEKMHTNIIKHMDFYIMPV	X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;BONCAT;X;X;Deamidation (NQ);X;X;X;X;X;X;X;X;X;X;X;X	XXXXXXXXXXXXXXXPPPPPPPXXXXXXXXX	M(1)HTNIIK	M(47.74)HTNIIK	1	3	-3.6331	0.064893	0.064893	NaN	NaN	0.15527	0.15527	NaN	NaN	NaN	+	1	133.86	3	3	Median	0.05288	0.05288	NaN	NaN	0.17487	0.17487	NaN	NaN	NaN	+	1	58.8	Median	3	3	0.81489	0.81489	NaN	NaN	1.0222	1.0222	NaN	NaN	NaN	+	1	80.92	3	3	Median	NaN	NaN	NaN	283370	257470	14075	11818	NaN	NaN	NaN		+	0	50	207	207	896	932	4789;4790;4791;4792	18841;18842;18843;18844;18845;18846	4792	18846	SET1- 1A- NON LINEAR-1	37743	4789	18841	SET1- 1A- NON LINEAR-1	34697	4789	18841	SET1- 1A- NON LINEAR-1	34697
sp|O15123|ANGP2_HUMAN	489	sp|O15123|ANGP2_HUMAN	sp|O15123|ANGP2_HUMAN	>sp|O15123|ANGP2_HUMAN Angiopoietin-2 OS=Homo sapiens GN=ANGPT2 PE=1 SV=1	0.997486	25.9859	0.00459003	57.532	21.654	48.998		1	M	WYYWKGSGYSIKATTMMIRPADF________	X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;BONCAT;Oxidation (M);X;X;X;X;X;X;X;X;X;X;X;X;X;X	XXXXXXXXXXXXPPPPPPPPPPPXXXXXXXX	ATTM(0.997)M(0.003)IRPADF	ATTM(25.99)M(-25.99)IRPADF	4	3	3.7548	28.495	28.495	NaN	NaN	84.136	84.136	NaN	NaN	NaN	+	1	153.91	2	2	Median	1.7259	1.7259	NaN	NaN	6.7098	6.7098	NaN	NaN	NaN	+	1	119.42	Median	2	2	0.060569	0.060569	NaN	NaN	0.073102	0.073102	NaN	NaN	NaN	+	1	34.488	2	2	Median	NaN	NaN	NaN	137320	3173	128140	6009	NaN	NaN	NaN			1	88	489	489	117	121	565;566	2123;2124;2125;2126;2127;2128;2129;2130;2131;2132	566	2132	SET1- 1A- NON LINEAR-1	73453	565	2125	SET1- 1A- NON LINEAR-1	71310	565	2125	SET1- 1A- NON LINEAR-1	71310
sp|O75445|USH2A_HUMAN	185	sp|O75445|USH2A_HUMAN	sp|O75445|USH2A_HUMAN	>sp|O75445|USH2A_HUMAN Usherin OS=Homo sapiens GN=USH2A PE=1 SV=3	1	44.5427	0.00782514	44.543	29.148	44.543		1	M	DGQIVFKITISEKETMFYYRTVNGIQPPIKV	X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;BONCAT;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X	XXXXXXXPPPPPPPPPPPPPXXXXXXXXXXX	ITISEKETM(1)FYYR	ITISEKETM(44.54)FYYR	9	4	1.0143																																														NaN	NaN	NaN	10514	10514	0	0	NaN	NaN	NaN			2	93	185	185	817	849	4186	16668	4186	16668	SET1- 1A- NON LINEAR-1	140316	4186	16668	SET1- 1A- NON LINEAR-1	140316	4186	16668	SET1- 1A- NON LINEAR-1	140316
tr|E7EPA6|E7EPA6_HUMAN;sp|P07942|LAMB1_HUMAN;tr|G3XAI2|G3XAI2_HUMAN	148;148;172	tr|E7EPA6|E7EPA6_HUMAN	tr|E7EPA6|E7EPA6_HUMAN	>tr|E7EPA6|E7EPA6_HUMAN Laminin subunit beta-1 OS=Homo sapiens GN=LAMB1 PE=2 SV=1;>sp|P07942|LAMB1_HUMAN Laminin subunit beta-1 OS=Homo sapiens GN=LAMB1 PE=1 SV=2;>tr|G3XAI2|G3XAI2_HUMAN Laminin subunit beta-1 OS=Homo sapiens GN=LAMB1 PE=4 SV=1	1	46.7962	0.0441135	46.796	13.904	46.796		1	M	FTHIIMTFKTFRPAAMIIERSSDFGKTWGVY	X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;BONCAT;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X	XXXXXXXXXPPPPPPPPPPPXXXXXXXXXXX	TFRPAAM(1)IIER	TFRPAAM(46.8)IIER	7	2	-5.143																																														NaN	NaN	NaN	21468	0	21468	0	NaN	NaN	NaN			3	118	148	148	1242	1298	6645	25956	6645	25956	SET1- 1A- NON LINEAR-1	52762	6645	25956	SET1- 1A- NON LINEAR-1	52762	6645	25956	SET1- 1A- NON LINEAR-1	52762
sp|P18850|ATF6A_HUMAN	500	sp|P18850|ATF6A_HUMAN	sp|P18850|ATF6A_HUMAN	>sp|P18850|ATF6A_HUMAN Cyclic AMP-dependent transcription factor ATF-6 alpha OS=Homo sapiens GN=ATF6 PE=1 SV=3	1	43.0829	0.00203803	43.083	22.023	43.083		1	M	GWVHRHEVERTKSRRMTNNQQKTRIIQGAIE	X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;BONCAT;X;X;Deamidation (NQ);X;X;X;X;X;X;X;X;X;X;X;X	XXXXXXXXXXXXXXXPPPPPPPPPXXXXXXX	M(1)TNNQQKTR	M(43.08)TNNQQKTR	1	3	-3.7468	0.35814	0.35814	NaN	NaN	1.0574	1.0574	NaN	NaN	NaN	+	1	NaN	1	0	Median	0.33957	0.33957	NaN	NaN	1.3201	1.3201	NaN	NaN	NaN	+	1	NaN	Median	1	0	0.96049	0.96049	NaN	NaN	1.1592	1.1592	NaN	NaN	NaN	+	1	NaN	1	0	Median	NaN	NaN	NaN	20173	11783	4505.1	3884.4	NaN	NaN	NaN			4	142	500	500	922	960	4911	19308;19309;19310	4911	19308	SET1- 1A- NON LINEAR-1	170254	4911	19308	SET1- 1A- NON LINEAR-1	170254	4911	19308	SET1- 1A- NON LINEAR-1	170254
tr|E9PQX2|E9PQX2_HUMAN;tr|E9PQ96|E9PQ96_HUMAN;tr|E9PJH4|E9PJH4_HUMAN;tr|F2Z2S8|F2Z2S8_HUMAN;tr|E9PK82|E9PK82_HUMAN;tr|E9PPU1|E9PPU1_HUMAN;tr|E9PL09|E9PL09_HUMAN;sp|P23396|RS3_HUMAN	1;1;1;1;1;1;1;1	tr|E9PQX2|E9PQX2_HUMAN	tr|E9PQX2|E9PQX2_HUMAN	>tr|E9PQX2|E9PQX2_HUMAN 40S ribosomal protein S3 OS=Homo sapiens GN=RPS3 PE=2 SV=1;>tr|E9PQ96|E9PQ96_HUMAN 40S ribosomal protein S3 OS=Homo sapiens GN=RPS3 PE=2 SV=1;>tr|E9PJH4|E9PJH4_HUMAN 40S ribosomal protein S3 OS=Homo sapiens GN=RPS3 PE=2 SV=1;>tr|F2Z	1	50.9659	0.00477845	82.305	30.267	50.966		1	M	_______________MAVQISKKRKFVADGI	X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;BONCAT;X;X;Deamidation (NQ);X;X;X;X;X;X;X;X;X;X;X;X	XXXXXXXXXXXXXXXPPPPPPPXXXXXXXXX	M(1)AVQISK	M(50.97)AVQISK	1	4	4.0227	0.023605	0.023605	NaN	NaN	0.05648	0.05648	NaN	NaN	NaN	+	1	NaN	1	1	Median	0.0097547	0.0097547	NaN	NaN	0.032258	0.032258	NaN	NaN	NaN	+	1	NaN	Median	1	1	0.41325	0.41325	NaN	NaN	0.51839	0.51839	NaN	NaN	NaN	+	1	NaN	1	1	Median	NaN	NaN	NaN	438730	421590	12858	4286	NaN	NaN	NaN			5	145	1	1	882	917	4732;4733	18708;18709;18710;18711;18712;18713;18714;18715;18716;18717;18718;18719;18720;18721;18722;18723;18724;18725;18726;18727;18728;18729;18730;18731;18732;18733;18734;18735;18736;18737;18738	4733	18738	SET1- 1A- NON LINEAR-1	47219	4732	18731	SET1- 1A- NON LINEAR-1	47396	4732	18731	SET1- 1A- NON LINEAR-1	47396
tr|K7ELM6|K7ELM6_HUMAN;tr|K7EIW3|K7EIW3_HUMAN;sp|P52564|MP2K6_HUMAN	42;101;98	tr|K7ELM6|K7ELM6_HUMAN	tr|K7ELM6|K7ELM6_HUMAN	>tr|K7ELM6|K7ELM6_HUMAN Dual-specificity mitogen-activated protein kinase kinase 6 (Fragment) OS=Homo sapiens GN=MAP2K6 PE=2 SV=1;>tr|K7EIW3|K7EIW3_HUMAN Dual-specificity mitogen-activated protein kinase kinase 6 (Fragment) OS=Homo sapiens GN=MAP2K6 PE=2 S	0.999997	55.1068	0.0234417	59.153	24.385	59.153		1	M	RIRATVNSQEQKRIIMDIDISMRTVDCPFTV	X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;BONCAT;X;X;X;X;X;Met->aha(tag);X;X;X;X;X;X;X;X;X	XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX	IIM(1)DIDISMR	IIM(55.11)DIDISM(-55.11)R	3	2	3.9263																																														NaN	NaN	NaN	6716.8	6716.8	0	0	NaN	NaN	NaN			6	162	42	42	714	744	3365	14531	3365	14531	SET1- 1A- NON LINEAR-1	158966	3365	14531	SET1- 1A- NON LINEAR-1	158966	3365	14531	SET1- 1A- NON LINEAR-1	158966
tr|M0R0F9|M0R0F9_HUMAN;tr|W4VSQ9|W4VSQ9_HUMAN;sp|Q15642|CIP4_HUMAN;tr|J3QSS4|J3QSS4_HUMAN;sp|Q5T0N5|FBP1L_HUMAN;tr|S4R347|S4R347_HUMAN	263;371;427;431;431;431	tr|M0R0F9|M0R0F9_HUMAN	tr|M0R0F9|M0R0F9_HUMAN	>tr|M0R0F9|M0R0F9_HUMAN Cdc42-interacting protein 4 OS=Homo sapiens GN=TRIP10 PE=2 SV=1;>tr|W4VSQ9|W4VSQ9_HUMAN Cdc42-interacting protein 4 OS=Homo sapiens GN=TRIP10 PE=4 SV=1;>sp|Q15642|CIP4_HUMAN Cdc42-interacting protein 4 OS=Homo sapiens GN=TRIP10 PE=1	1	43.8078	0.0552954	43.808	9.9324	43.808		1	M	REIQKEVDQREAIKKMKDVYEKTPQMGDPAS	X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;BONCAT;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X	XXXXXXXXXXXXXXXPPPPPPPXXXXXXXXX	M(1)KDVYEK	M(43.81)KDVYEK	1	3	3.4525	0.26309	0.26309	NaN	NaN	0.23412	0.23412	NaN	NaN	NaN	+	1	NaN	1	1	Median	0.51366	0.51366	NaN	NaN	0.50543	0.50543	NaN	NaN	NaN	+	1	NaN	Median	1	1	1.9525	1.9525	NaN	NaN	2.0952	2.0952	NaN	NaN	NaN	+	1	NaN	1	1	Median	NaN	NaN	NaN	15869	10335	2762	2772	NaN	NaN	NaN			7	182	263	263	906	942	4809;4810	18901;18902	4810	18902	SET1- 1A- NON LINEAR-1	22553	4810	18902	SET1- 1A- NON LINEAR-1	22553	4809	18901	SET1- 1A- NON LINEAR-1	22663
tr|F8W760|F8W760_HUMAN;tr|F8W8A2|F8W8A2_HUMAN;tr|J3KP11|J3KP11_HUMAN;tr|F8W9Z1|F8W9Z1_HUMAN;sp|Q15878|CAC1E_HUMAN	595;920;939;969;988	tr|F8W760|F8W760_HUMAN	tr|F8W760|F8W760_HUMAN	>tr|F8W760|F8W760_HUMAN Voltage-dependent R-type calcium channel subunit alpha-1E OS=Homo sapiens GN=CACNA1E PE=2 SV=1;>tr|F8W8A2|F8W8A2_HUMAN Voltage-dependent R-type calcium channel subunit alpha-1E OS=Homo sapiens GN=CACNA1E PE=2 SV=1;>tr|J3KP11|J3KP11_	1	56.2581	0.0148883	56.258	8.4426	56.258		1	M	IQEERAQDIRRTNSIMVSRGSGIAGGIDEAD	X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;BONCAT;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X	XXXXXXXXXXPPPPPPPPPXXXXXXXXXXXX	RTNSIM(1)VSR	RTNSIM(56.26)VSR	6	3	0.14103	0.030425	0.030425	NaN	NaN	0.037369	0.037369	NaN	NaN	NaN	+	1	NaN	1	1	Median	0.024689	0.024689	NaN	NaN	0.024708	0.024708	NaN	NaN	NaN	+	1	NaN	Median	1	1	0.81147	0.81147	NaN	NaN	0.90194	0.90194	NaN	NaN	NaN	+	1	NaN	1	1	Median	NaN	NaN	NaN	32061	30274	1157	630	NaN	NaN	NaN			8	183	595	595	1094	1141	5939	22636;22637	5939	22636	SET1- 1A- NON LINEAR-1	65769	5939	22636	SET1- 1A- NON LINEAR-1	65769	5939	22636	SET1- 1A- NON LINEAR-1	65769
sp|Q3V6T2|GRDN_HUMAN	496	sp|Q3V6T2|GRDN_HUMAN	sp|Q3V6T2|GRDN_HUMAN	>sp|Q3V6T2|GRDN_HUMAN Girdin OS=Homo sapiens GN=CCDC88A PE=1 SV=2	1	41.2271	0.0393889	41.227	8.6172	41.227		1	M	TTVDSVEGNASKIIKMEKENQRISKKVEIIE	X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;BONCAT;X;X;X;X;Deamidation (NQ);X;X;X;X;X;X;X;X;X;X	XXXXXXXXXXXXXXXPPPPPPPXXXXXXXXX	M(1)EKENQR	M(41.23)EKENQR	1	2	-0.25053																																														NaN	NaN	NaN	5575	0	5575	0	NaN	NaN	NaN			9	188	496	496	889	924	4761	18781	4761	18781	SET1- 1A- NON LINEAR-1	87592	4761	18781	SET1- 1A- NON LINEAR-1	87592	4761	18781	SET1- 1A- NON LINEAR-1	87592
sp|Q86VF7|NRAP_HUMAN	979	sp|Q86VF7|NRAP_HUMAN	sp|Q86VF7|NRAP_HUMAN	>sp|Q86VF7|NRAP_HUMAN Nebulin-related-anchoring protein OS=Homo sapiens GN=NRAP PE=2 SV=2	1	49.7151	0.0055378	49.715	12.159	49.715		1	M	HPDAIKFTSIKDTPEMVQARISYTQAVDRIY	X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;BONCAT;X;Deamidation (NQ);X;X;X;X;X;X;X;X;X;X;X;X;X	XXXXXXXXXXXPPPPPPPPPXXXXXXXXXXX	DTPEM(1)VQAR	DTPEM(49.72)VQAR	5	2	0.4433	0.34041	0.34041	NaN	NaN	1.0051	1.0051	NaN	NaN	NaN	+	1	NaN	1	0	Median	0.30821	0.30821	NaN	NaN	1.1982	1.1982	NaN	NaN	NaN	+	1	NaN	Median	1	0	0.89085	0.89085	NaN	NaN	1.0752	1.0752	NaN	NaN	NaN	+	1	NaN	1	0	Median	NaN	NaN	NaN	70183	44668	13583	11933	NaN	NaN	NaN			10	201	979	979	285	298	1415	5868;5869	1415	5868	SET1- 1A- NON LINEAR-1	91931	1415	5868	SET1- 1A- NON LINEAR-1	91931	1415	5868	SET1- 1A- NON LINEAR-1	91931
sp|Q8IXS6|PALM2_HUMAN;tr|D3YTA4|D3YTA4_HUMAN	1;1	sp|Q8IXS6|PALM2_HUMAN	sp|Q8IXS6|PALM2_HUMAN	>sp|Q8IXS6|PALM2_HUMAN Paralemmin-2 OS=Homo sapiens GN=PALM2 PE=2 SV=3;>tr|D3YTA4|D3YTA4_HUMAN HCG28765, isoform CRA_c OS=Homo sapiens GN=PALM2 PE=4 SV=1	1	40.4964	0.0192379	40.496	18.004	40.496		2	M	_______________MEMAEAEIHKERIQAI	X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;BONCAT;X;BONCAT;X;X;X;X;X;X;X;X;X;X;X;X;X	XXXXXXXXXXXXXXXPPPPPPPPPPXXXXXX	M(1)EM(1)AEAEIHK	M(40.5)EM(40.5)AEAEIHK	1	2	-5.3594																																														NaN	NaN	NaN	0	0	0	0	NaN	NaN	NaN			11	203	1	1	890	925	4762	18782	4762	18782	SET1- 1A- NON LINEAR-1	201841	4762	18782	SET1- 1A- NON LINEAR-1	201841	4762	18782	SET1- 1A- NON LINEAR-1	201841
sp|Q8IXS6|PALM2_HUMAN;tr|D3YTA4|D3YTA4_HUMAN	3;3	sp|Q8IXS6|PALM2_HUMAN	sp|Q8IXS6|PALM2_HUMAN	>sp|Q8IXS6|PALM2_HUMAN Paralemmin-2 OS=Homo sapiens GN=PALM2 PE=2 SV=3;>tr|D3YTA4|D3YTA4_HUMAN HCG28765, isoform CRA_c OS=Homo sapiens GN=PALM2 PE=4 SV=1	1	40.4964	0.0192379	40.496	18.004	40.496		2	M	_____________MEMAEAEIHKERIQAIAE	X;X;X;X;X;X;X;X;X;X;X;X;X;BONCAT;X;BONCAT;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X	XXXXXXXXXXXXXPPPPPPPPPPXXXXXXXX	M(1)EM(1)AEAEIHK	M(40.5)EM(40.5)AEAEIHK	3	2	-5.3594																																														NaN	NaN	NaN	0	0	0	0	NaN	NaN	NaN			12	203	3	3	890	925	4762	18782	4762	18782	SET1- 1A- NON LINEAR-1	201841	4762	18782	SET1- 1A- NON LINEAR-1	201841	4762	18782	SET1- 1A- NON LINEAR-1	201841
sp|Q8IY22|CMIP_HUMAN	742	sp|Q8IY22|CMIP_HUMAN	sp|Q8IY22|CMIP_HUMAN	>sp|Q8IY22|CMIP_HUMAN C-Maf-inducing protein OS=Homo sapiens GN=CMIP PE=1 SV=3	1	54.1976	0.00771202	54.198	22.85	54.198		1	M	GIIAISSMKSICSINMNSTKISADTYEDIKA	X;X;X;X;X;X;X;X;X;X;X;X;X;X;Deamidation (NQ);BONCAT;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X	XXXXXXXXXPPPPPPPPPPPXXXXXXXXXXX	SICSINM(1)NSTK	SICSINM(54.2)NSTK	7	2	-5.43																																														NaN	NaN	NaN	25429	25429	0	0	NaN	NaN	NaN			13	204	742	742	1141	1189	6080	23228	6080	23228	SET1- 1A- NON LINEAR-1	177679	6080	23228	SET1- 1A- NON LINEAR-1	177679	6080	23228	SET1- 1A- NON LINEAR-1	177679
tr|F5H259|F5H259_HUMAN;tr|F5H6W7|F5H6W7_HUMAN;sp|Q8N323|NXPE1_HUMAN	1;1;1	tr|F5H259|F5H259_HUMAN	tr|F5H259|F5H259_HUMAN	>tr|F5H259|F5H259_HUMAN NXPE family member 1 (Fragment) OS=Homo sapiens GN=NXPE1 PE=2 SV=1;>tr|F5H6W7|F5H6W7_HUMAN NXPE family member 1 OS=Homo sapiens GN=NXPE1 PE=2 SV=1;>sp|Q8N323|NXPE1_HUMAN NXPE family member 1 OS=Homo sapiens GN=NXPE1 PE=2 SV=2	0.992819	21.4362	0.0134206	53.756	18.215	53.756		1	M	_______________MSSNTMIQKTIIIIIS	X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;BONCAT;X;X;X;X;Met->aha(tag);X;Deamidation (NQ);X;X;X;X;X;X;X;X	XXXXXXXXXXXXXXXPPPPPPPPPXXXXXXX	M(0.993)SSNTM(0.007)IQK	M(21.44)SSNTM(-21.44)IQK	1	3	-5.7591	0.037937	0.037937	NaN	NaN	0.090773	0.090773	NaN	NaN	NaN	+	1	NaN	1	1	Median	0.027179	0.027179	NaN	NaN	0.089881	0.089881	NaN	NaN	NaN	+	1	NaN	Median	1	1	0.71644	0.71644	NaN	NaN	0.89871	0.89871	NaN	NaN	NaN	+	1	NaN	1	1	Median	NaN	NaN	NaN	77636	74740	1508	1388	NaN	NaN	NaN			14	206	1	1	919	956	4906	19292	4906	19292	SET1- 1A- NON LINEAR-1	16331	4906	19292	SET1- 1A- NON LINEAR-1	16331	4906	19292	SET1- 1A- NON LINEAR-1	16331
sp|Q8N441|FGRL1_HUMAN	155	sp|Q8N441|FGRL1_HUMAN	sp|Q8N441|FGRL1_HUMAN	>sp|Q8N441|FGRL1_HUMAN Fibroblast growth factor receptor-like 1 OS=Homo sapiens GN=FGFRL1 PE=1 SV=1	1	57.0474	0.0459984	57.047	11.889	57.047		1	M	ASQQWARPRFTQPSKMRRRVIARPVGSSVRI	X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;BONCAT;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X	XXXXXXXXXPPPPPPPPXXXXXXXXXXXXXX	FTQPSKM(1)R	FTQPSKM(57.05)R	7	2	2.8369																																														NaN	NaN	NaN	35266	0	0	35266	NaN	NaN	NaN			15	207	155	155	478	499	2279	9372	2279	9372	SET1- 1A- NON LINEAR-1	53014	2279	9372	SET1- 1A- NON LINEAR-1	53014	2279	9372	SET1- 1A- NON LINEAR-1	53014
tr|H0YMB8|H0YMB8_HUMAN;sp|Q8N5R6|CCD33_HUMAN;tr|C9JFX2|C9JFX2_HUMAN	369;691;691	tr|H0YMB8|H0YMB8_HUMAN	tr|H0YMB8|H0YMB8_HUMAN	>tr|H0YMB8|H0YMB8_HUMAN Coiled-coil domain-containing protein 33 (Fragment) OS=Homo sapiens GN=CCDC33 PE=4 SV=1;>sp|Q8N5R6|CCD33_HUMAN Coiled-coil domain-containing protein 33 OS=Homo sapiens GN=CCDC33 PE=1 SV=3;>tr|C9JFX2|C9JFX2_HUMAN Coiled-coil domain-c	1	51.2762	0.0120191	51.276	30.893	51.276		1	M	EEGQGKASEAQNTVSMKQKIIISEIDMKKIR	X;X;X;X;X;X;X;X;X;X;Deamidation (NQ);X;X;X;X;BONCAT;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X	XXXXXXPPPPPPPPPPPXXXXXXXXXXXXXX	ASEAQNTVSM(1)K	ASEAQNTVSM(51.28)K	10	3	0.13553																																														NaN	NaN	NaN	4485	0	0	4485	NaN	NaN	NaN			16	208	369	369	107	110	533	1967;1968;1969;1970	533	1968	SET1- 1A- NON LINEAR-1	78196	533	1968	SET1- 1A- NON LINEAR-1	78196	533	1968	SET1- 1A- NON LINEAR-1	78196
sp|Q8TDF5|NETO1_HUMAN	478	sp|Q8TDF5|NETO1_HUMAN	sp|Q8TDF5|NETO1_HUMAN	>sp|Q8TDF5|NETO1_HUMAN Neuropilin and tolloid-like protein 1 OS=Homo sapiens GN=NETO1 PE=2 SV=2	1	41.5021	0.0209245	58.246	30.306	41.502		1	M	GKPIIPPMNRRNIIVMKHSYSQDAADACDID	X;X;X;X;X;X;X;X;X;X;X;Deamidation (NQ);X;X;X;BONCAT;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X	XXXXXXXXXXPPPPPPPXXXXXXXXXXXXXX	RNIIVM(1)K	RNIIVM(41.5)K	6	2	-5.7539	0.018775	0.018775	NaN	NaN	0.019956	0.019956	NaN	NaN	NaN	+	1	NaN	1	1	Median	0.012515	0.012515	NaN	NaN	0.016395	0.016395	NaN	NaN	NaN	+	1	NaN	Median	1	1	0.66657	0.66657	NaN	NaN	0.32317	0.32317	NaN	NaN	NaN	+	1	NaN	1	1	Median	NaN	NaN	NaN	19637	19129	309	199	NaN	NaN	NaN			17	214	478	478	1080	1126;1127	5893;5894	22430;22431;22432;22433;22434;22435;22436	5894	22436	SET1- 1A- NON LINEAR-1	108284	5893	22434	SET1- 1A- NON LINEAR-1	109135	5893	22434	SET1- 1A- NON LINEAR-1	109135
sp|Q92681|RSCA1_HUMAN	216	sp|Q92681|RSCA1_HUMAN	sp|Q92681|RSCA1_HUMAN	>sp|Q92681|RSCA1_HUMAN Regulatory solute carrier protein family 1 member 1 OS=Homo sapiens GN=RSC1A1 PE=2 SV=1	1	61.6789	0.0279528	61.679	10.874	61.679		1	M	ERQQNQHKIVDIEATMKGNGIPQNVDPPSAK	X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;BONCAT;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X	XXXXXXXXPPPPPPPPPXXXXXXXXXXXXXX	IVDIEATM(1)K	IVDIEATM(61.68)K	8	2	2.6588																																														NaN	NaN	NaN	33033	33033	0	0	NaN	NaN	NaN			18	218	216	216	827	859	4211	16767	4211	16767	SET1- 1A- NON LINEAR-1	152311	4211	16767	SET1- 1A- NON LINEAR-1	152311	4211	16767	SET1- 1A- NON LINEAR-1	152311
tr|B4DWK3|B4DWK3_HUMAN;sp|Q92754|AP2C_HUMAN	182;351	tr|B4DWK3|B4DWK3_HUMAN	tr|B4DWK3|B4DWK3_HUMAN	>tr|B4DWK3|B4DWK3_HUMAN Transcription factor AP-2 gamma OS=Homo sapiens GN=TFAP2C PE=2 SV=1;>sp|Q92754|AP2C_HUMAN Transcription factor AP-2 gamma OS=Homo sapiens GN=TFAP2C PE=1 SV=1	1	40.4964	0.0150943	40.496	23.583	40.496		1	M	RPHIGGRNEMAARKNMIIAAQQICKEFTEII	X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;BONCAT;X;X;X;X;Deamidation (NQ);Deamidation (NQ);X;X;X;X;X;X;X;X;X	XXXXXXXXXXXXXXPPPPPPPPPPPXXXXXX	NM(1)IIAAQQICK	NM(40.5)IIAAQQICK	2	3	-8.2918																																														NaN	NaN	NaN	0	0	0	0	NaN	NaN	NaN			19	219	182	182	949	989	5019	19757	5019	19757	SET1- 1A- NON LINEAR-1	132230	5019	19757	SET1- 1A- NON LINEAR-1	132230	5019	19757	SET1- 1A- NON LINEAR-1	132230
tr|E5RFS1|E5RFS1_HUMAN;tr|E5RG35|E5RG35_HUMAN;tr|E5RK55|E5RK55_HUMAN;sp|Q92905|CSN5_HUMAN	1;1;1;1	tr|E5RFS1|E5RFS1_HUMAN	tr|E5RFS1|E5RFS1_HUMAN	>tr|E5RFS1|E5RFS1_HUMAN COP9 signalosome complex subunit 5 OS=Homo sapiens GN=COPS5 PE=2 SV=1;>tr|E5RG35|E5RG35_HUMAN COP9 signalosome complex subunit 5 OS=Homo sapiens GN=COPS5 PE=2 SV=1;>tr|E5RK55|E5RK55_HUMAN COP9 signalosome complex subunit 5 OS=Homo s	1	41.3995	0.0171108	41.399	7.8106	41.399		2	M	_______________MAASGSGMAQKTWEIA	X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;BONCAT;X;X;X;X;X;X;BONCAT;X;Deamidation (NQ);X;X;X;X;X;X	XXXXXXXXXXXXXXXPPPPPPPPPPPXXXXX	M(1)AASGSGM(1)AQK	M(41.4)AASGSGM(41.4)AQK	1	3	-2.6387	0.052591	NaN	0.052591	NaN	0.12584	NaN	0.12584	NaN	NaN	+	2	NaN	1	1	Median																															NaN	NaN	NaN	17652	16890	623	139	NaN	NaN	NaN			20	220	1	1	876	911	4723	18655	4723	18655	SET1- 1A- NON LINEAR-1	119056	4723	18655	SET1- 1A- NON LINEAR-1	119056	4723	18655	SET1- 1A- NON LINEAR-1	119056
tr|E5RFS1|E5RFS1_HUMAN;tr|E5RG35|E5RG35_HUMAN;tr|E5RK55|E5RK55_HUMAN;sp|Q92905|CSN5_HUMAN	8;8;8;8	tr|E5RFS1|E5RFS1_HUMAN	tr|E5RFS1|E5RFS1_HUMAN	>tr|E5RFS1|E5RFS1_HUMAN COP9 signalosome complex subunit 5 OS=Homo sapiens GN=COPS5 PE=2 SV=1;>tr|E5RG35|E5RG35_HUMAN COP9 signalosome complex subunit 5 OS=Homo sapiens GN=COPS5 PE=2 SV=1;>tr|E5RK55|E5RK55_HUMAN COP9 signalosome complex subunit 5 OS=Homo s	1	41.3995	0.0171108	41.399	7.8106	41.399		2	M	________MAASGSGMAQKTWEIANNMQEAQ	X;X;X;X;X;X;X;X;BONCAT;X;X;X;X;X;X;BONCAT;X;Deamidation (NQ);X;X;X;X;X;X;X;X;X;X;X;X;X	XXXXXXXXPPPPPPPPPPPXXXXXXXXXXXX	M(1)AASGSGM(1)AQK	M(41.4)AASGSGM(41.4)AQK	8	3	-2.6387	0.052591	NaN	0.052591	NaN	0.12584	NaN	0.12584	NaN	NaN	+	2	NaN	1	1	Median																															NaN	NaN	NaN	17652	16890	623	139	NaN	NaN	NaN			21	220	8	8	876	911	4723	18655	4723	18655	SET1- 1A- NON LINEAR-1	119056	4723	18655	SET1- 1A- NON LINEAR-1	119056	4723	18655	SET1- 1A- NON LINEAR-1	119056
sp|Q969E8|TSR2_HUMAN	55	sp|Q969E8|TSR2_HUMAN	sp|Q969E8|TSR2_HUMAN	>sp|Q969E8|TSR2_HUMAN Pre-rRNA-processing protein TSR2 homolog OS=Homo sapiens GN=TSR2 PE=1 SV=1	1	43.6798	0.0506019	43.68	7.2846	43.68		1	M	QEKAKWIGGAVEDYFMRNADIEIDEVEDFIG	X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;BONCAT;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X	XXXXXPPPPPPPPPPPPXXXXXXXXXXXXXX	WIGGAVEDYFM(1)R	WIGGAVEDYFM(43.68)R	11	2	1.0584	41.013	41.013	NaN	NaN	121.1	121.1	NaN	NaN	NaN	+	1	NaN	1	1	Median	2.0512	2.0512	NaN	NaN	7.9742	7.9742	NaN	NaN	NaN	+	1	NaN	Median	1	1	0.050013	0.050013	NaN	NaN	0.060362	0.060362	NaN	NaN	NaN	+	1	NaN	1	1	Median	NaN	NaN	NaN	26297	632	24170	1495	NaN	NaN	NaN			22	222	55	55	1442	1509	7816	29582	7816	29582	SET1- 1A- NON LINEAR-1	158904	7816	29582	SET1- 1A- NON LINEAR-1	158904	7816	29582	SET1- 1A- NON LINEAR-1	158904
sp|Q9BWT3|PAPOG_HUMAN	475	sp|Q9BWT3|PAPOG_HUMAN	sp|Q9BWT3|PAPOG_HUMAN	>sp|Q9BWT3|PAPOG_HUMAN Poly(A) polymerase gamma OS=Homo sapiens GN=PAPOLG PE=1 SV=2	1	40.7239	0.047928	40.724	19.636	40.724		1	M	QSFTDTVYRQANNINMIKEGMKIEATHVKKK	X;X;X;X;X;X;X;X;X;X;X;X;Deamidation (NQ);X;X;BONCAT;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X	XXXXXXXXXPPPPPPPPPXXXXXXXXXXXXX	QANNINM(1)IK	QANNINM(40.72)IK	7	3	-1.3414																																														NaN	NaN	NaN	0	0	0	0	NaN	NaN	NaN			23	230	475	475	987	1028	5176	20231	5176	20231	SET1- 1A- NON LINEAR-1	87373	5176	20231	SET1- 1A- NON LINEAR-1	87373	5176	20231	SET1- 1A- NON LINEAR-1	87373
tr|G3V274|G3V274_HUMAN;sp|Q9UL15|BAG5_HUMAN	190;190	tr|G3V274|G3V274_HUMAN	tr|G3V274|G3V274_HUMAN	>tr|G3V274|G3V274_HUMAN BAG family molecular chaperone regulator 5 (Fragment) OS=Homo sapiens GN=BAG5 PE=2 SV=1;>sp|Q9UL15|BAG5_HUMAN BAG family molecular chaperone regulator 5 OS=Homo sapiens GN=BAG5 PE=1 SV=1	1	41.3995	0.0166192	41.399	7.1351	41.399		1	M	ISEDAHPSVAKINFVMCEVNKARGVIIAIIM	X;X;X;X;X;X;X;X;X;X;X;X;Deamidation (NQ);X;X;BONCAT;X;X;X;Deamidation (NQ);X;X;X;X;X;X;X;X;X;X;X	XXXXXXXXXXXPPPPPPPPPPXXXXXXXXXX	INFVM(1)CEVNK	INFVM(41.4)CEVNK	5	2	-3.8511																																														NaN	NaN	NaN	0	0	0	0	NaN	NaN	NaN			24	243	190	190	742	773	3539	15288	3539	15288	SET1- 1A- NON LINEAR-1	177897	3539	15288	SET1- 1A- NON LINEAR-1	177897	3539	15288	SET1- 1A- NON LINEAR-1	177897
tr|B4DXS0|B4DXS0_HUMAN	121	tr|B4DXS0|B4DXS0_HUMAN	tr|B4DXS0|B4DXS0_HUMAN	>tr|B4DXS0|B4DXS0_HUMAN G kinase-anchoring protein 1 OS=Homo sapiens GN=GKAP1 PE=2 SV=1	1	44.8822	0.035944	55.064	31.691	44.882		1	M	SREENWQEWRQRDEQMGSRRQ__________	X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;BONCAT;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X	XXXXXXXXXXPPPPPPPPPXXXXXXXXXXXX	QRDEQM(1)GSR	QRDEQM(44.88)GSR	6	3	-0.75816	0.18983	0.18983	NaN	NaN	0.23316	0.23316	NaN	NaN	NaN	+	1	NaN	1	1	Median																															NaN	NaN	NaN	11397	10143	750	504	NaN	NaN	NaN			25	253	121	121	1040	1082	5520;5521	21326;21327	5521	21327	SET1- 1A- NON LINEAR-1	35226	5520	21326	SET1- 1A- NON LINEAR-1	35027	5521	21327	SET1- 1A- NON LINEAR-1	35226
tr|F8WBD6|F8WBD6_HUMAN;tr|Q6JV79|Q6JV79_HUMAN;tr|C9J8U3|C9J8U3_HUMAN	1;1;1	tr|F8WBD6|F8WBD6_HUMAN	tr|F8WBD6|F8WBD6_HUMAN	>tr|F8WBD6|F8WBD6_HUMAN Aprataxin OS=Homo sapiens GN=APTX PE=2 SV=1;>tr|Q6JV79|Q6JV79_HUMAN Aprataxin OS=Homo sapiens GN=APTX PE=4 SV=1;>tr|C9J8U3|C9J8U3_HUMAN Aprataxin (Fragment) OS=Homo sapiens GN=APTX PE=2 SV=1	0.5	0	0.0175091	48.794	18.973	41.448		1	M	_______________MMRVCWIVRQDSRHQR	X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;BONCAT;Met->aha(tag);X;X;X;X;X;X;X;X;X;X;X;X;X;X	XXXXXXXXXXXXXXXPPPPPPPPPXXXXXXX	M(0.5)M(0.5)RVCWIVR	M(0)M(0)RVCWIVR	1	3	-1.0512	0.07389	0.07389	NaN	NaN	0.090755	0.090755	NaN	NaN	NaN		1	21.482	2	2	Median	0.15549	0.15549	NaN	NaN	0.15561	0.15561	NaN	NaN	NaN		1	0.91774	Median	2	2	2.1044	2.1044	NaN	NaN	2.339	2.339	NaN	NaN	NaN		1	20.564	2	2	Median	NaN	NaN	NaN	21427	17968	1041	2418	NaN	NaN	NaN			26	254	1	1	909	945	4814;4815;4816;4817;4818;4819;4820;4821	18908;18909;18910;18911;18912;18913;18914;18915;18916	4821	18916	SET1- 1A- NON LINEAR-1	141072	4815	18909	SET1- 1A- NON LINEAR-1	141313	4820	18915	SET1- 1A- NON LINEAR-1	140904
tr|F8WBD6|F8WBD6_HUMAN;tr|Q6JV79|Q6JV79_HUMAN;tr|C9J8U3|C9J8U3_HUMAN	2;2;2	tr|F8WBD6|F8WBD6_HUMAN	tr|F8WBD6|F8WBD6_HUMAN	>tr|F8WBD6|F8WBD6_HUMAN Aprataxin OS=Homo sapiens GN=APTX PE=2 SV=1;>tr|Q6JV79|Q6JV79_HUMAN Aprataxin OS=Homo sapiens GN=APTX PE=4 SV=1;>tr|C9J8U3|C9J8U3_HUMAN Aprataxin (Fragment) OS=Homo sapiens GN=APTX PE=2 SV=1	0.5	0	0.0175091	48.794	18.973	41.448		1	M	______________MMRVCWIVRQDSRHQRI	X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;X	XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX	M(0.5)M(0.5)RVCWIVR	M(0)M(0)RVCWIVR	2	3	-1.0512	0.07389	0.07389	NaN	NaN	0.090755	0.090755	NaN	NaN	NaN		1	21.482	2	2	Median	0.15549	0.15549	NaN	NaN	0.15561	0.15561	NaN	NaN	NaN		1	0.91774	Median	2	2	2.1044	2.1044	NaN	NaN	2.339	2.339	NaN	NaN	NaN		1	20.564	2	2	Median	NaN	NaN	NaN	21427	17968	1041	2418	NaN	NaN	NaN			27	254	2	2	909	945	4814;4815;4816;4817;4818;4819;4820;4821	18908;18909;18910;18911;18912;18913;18914;18915;18916	4821	18916	SET1- 1A- NON LINEAR-1	141072	4815	18909	SET1- 1A- NON LINEAR-1	141313	4820	18915	SET1- 1A- NON LINEAR-1	140904
tr|J3KQ07|J3KQ07_HUMAN	286	tr|J3KQ07|J3KQ07_HUMAN	tr|J3KQ07|J3KQ07_HUMAN	>tr|J3KQ07|J3KQ07_HUMAN Ankyrin repeat and MYND domain-containing protein 1 OS=Homo sapiens GN=ANKMY1 PE=2 SV=1	0.999439	32.5106	0.00223446	75.109	43.687	75.109		1	M	PSPCTSSFDKGTMRRMAISMIE_________	X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;BONCAT;X;X;X;Oxidation (M);X;X;X;X;X;X;X;X;X;X;X	XXXXXXXXXXXXXXPPPPPPPPXXXXXXXXX	RM(0.999)AISM(0.001)IE	RM(32.51)AISM(-32.51)IE	2	2	-6.2028	0.014613	0.014613	NaN	NaN	0.043147	0.043147	NaN	NaN	NaN	+	1	NaN	1	1	Median	0.014398	0.014398	NaN	NaN	0.055973	0.055973	NaN	NaN	NaN	+	1	NaN	Median	1	1	0.98525	0.98525	NaN	NaN	1.1891	1.1891	NaN	NaN	NaN	+	1	NaN	1	1	Median	NaN	NaN	NaN	43416	42198	773	445	NaN	NaN	NaN			28	260	286	286	1078	1124	5891	22424;22425;22426;22427	5891	22427	SET1- 1A- NON LINEAR-1	69076	5891	22427	SET1- 1A- NON LINEAR-1	69076	5891	22427	SET1- 1A- NON LINEAR-1	69076
